Methods

Recent articles

Beyond the algorithmic oracle: Rethinking machine learning in behavioral neuroscience

Machine learning should not be a replacement for human judgment but rather help us embrace the various assumptions and interpretations that shape behavioral research.

By Nedah Nemati, Matthew Whiteway
3 December 2025 | 7 min read
A tree limb-like pattern superimposed over a landscape.

Tracing neuroscience’s family tree to track its growth

By mapping connections among researchers, Neurotree makes it possible to see how the field has evolved and how shifts in lab size, publication rates and training, among other factors, shape its direction.

By Stephen David
15 November 2025 | 7 min read
Portion of The Transmitter’s state of neuroscience semantic map.

Putting 50 years of neuroscience on the map

Navigate the rise and fall of research topics over five decades using our interactive map, which is based on a semantic analysis of nearly 350,000 abstracts in leading neuroscience journals.

By The Transmitter
15 November 2025 | 3 min read
Illustration of two hands holding an abstract geometric object that resembles a human brain.

The state of neuroscience in 2025: An overview

The Transmitter presents a portrait of the field through four lenses: its focus, its output, its people and its funding.

By The Transmitter
15 November 2025 | 4 min read
Concentric circles.

What are the most transformative neuroscience tools and technologies developed in the past five years?

Artificial intelligence and deep-learning methods featured prominently in the survey responses, followed by genetic tools to control circuits, advanced neuroimaging, transcriptomics and various approaches to record brain activity and behavior.

By The Transmitter
15 November 2025 | 14 min read
Research image of fMRI scans on a black background.

Timing tweak turns trashed fMRI scans into treasure

Leveraging start-up “dummy scans,” which are typically discarded in imaging analyses, can shorten an experiment’s length and make data collection more efficient, a new study reveals.

By Angie Voyles Askham
13 November 2025 | 6 min read
Speech bubbles and images of a brain overlaid on a globe.

A community-designed experiment tests open questions in predictive processing

More than 50 scientists came together to identify the key missing data needed to rigorously test theoretical models.

By Jérôme Lecoq
12 November 2025 | 6 min read
Hands hold a scroll-like object made of ones and zeroes.

How neuroscientists are using AI

Eight researchers explain how they are using large language models to analyze the literature, brainstorm hypotheses and interact with complex datasets.

By The Transmitter
4 November 2025 | 15 min read
Research image of altered neurovascular coupling after exposure to psychedelics.

Psychedelics muddy fMRI results: Q&A with Adam Bauer and Jonah Padawer-Curry

The drugs disrupt the link between vascular and neuronal activity, which complicates interpretations of fMRI data. Adopting a more holistic view of what constitutes brain activity may help, the researchers say.

By Calli McMurray
29 October 2025 | 7 min read

Vicente Raja brings ecological psychology concepts to neuroscience

He suggests neuroscientists should pay more attention to the principles of Gibsonian ecological psychology, such as affordances, ecological information and resonance, to better explain perception and action.

By Paul Middlebrooks
22 October 2025 | 99 min listen

Explore more from The Transmitter

Tatiana Engel explains how to connect high-dimensional neural circuitry with low-dimensional cognitive functions

Neuroscientists have long sought to understand the relationship between structure and function in the vast connectivity and activity patterns in the brain. Engel discusses her modeling approach to discovering the hidden patterns that connect the two.

By Paul Middlebrooks
3 December 2025 | 1 min read
A see-through human brain with circuits inside it.

‘Wired for Words: The Neural Architecture of Language,’ an excerpt

In his new book, Hickok provides a detailed overview of the research into the circuits that control speech and language. In this excerpt from Chapter 5, he shares how meeting his colleague David Poeppel led to them developing the theory for bilateral speech perception.

By Gregory Hickok
2 December 2025 | 8 min read

Plumbing the link between anti-CASPR2 antibodies and autism; and more

Here is a roundup of autism-related news and research spotted around the web for the week of 1 December.

By Jill Adams
2 December 2025 | 1 min read

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