Modeling
Recent articles
Long-sought walking circuit found in fruit flies
The neuronal circuit controlling repetitive locomotion patterns in any animal has been a mystery until now.
Long-sought walking circuit found in fruit flies
The neuronal circuit controlling repetitive locomotion patterns in any animal has been a mystery until now.
‘Digital sphinx’ raises questions about connectome models
The sphinx, with a worm’s brain and a fly’s body, illustrates the potential pitfalls of using deep-learning techniques to model biological processes.
‘Digital sphinx’ raises questions about connectome models
The sphinx, with a worm’s brain and a fly’s body, illustrates the potential pitfalls of using deep-learning techniques to model biological processes.
David Sussillo on persistence, luck and the bonds between life and work
In a Q&A about his new book, “Emergence,” Sussillo shares why he wrote it and how challenging circumstances shaped his journey into neuroscience.
David Sussillo on persistence, luck and the bonds between life and work
In a Q&A about his new book, “Emergence,” Sussillo shares why he wrote it and how challenging circumstances shaped his journey into neuroscience.
How to collaborate with AI
To make the best use of LLMs in research, turn your scientific question into a set of concrete, checkable proposals, wire up an automatic scoring loop, and let the AI iterate.
How to collaborate with AI
To make the best use of LLMs in research, turn your scientific question into a set of concrete, checkable proposals, wire up an automatic scoring loop, and let the AI iterate.
Bringing African ancestry into cellular neuroscience
Two independent teams in Africa are developing stem cell lines and organoids from local populations to explore neurodevelopmental and neurodegenerative conditions.
Bringing African ancestry into cellular neuroscience
Two independent teams in Africa are developing stem cell lines and organoids from local populations to explore neurodevelopmental and neurodegenerative conditions.
The 1,000 neuron challenge
A competition to design small, efficient neural models might provide new insight into real brains—and perhaps unite disparate modeling efforts.
The 1,000 neuron challenge
A competition to design small, efficient neural models might provide new insight into real brains—and perhaps unite disparate modeling efforts.
The Transmitter’s favorite essays of 2025
Throughout a tumultuous year in science, researchers opined on policy changes and funding uncertainty, as well as scientific trends and the impact of artificial-intelligence tools on the field.
The Transmitter’s favorite essays of 2025
Throughout a tumultuous year in science, researchers opined on policy changes and funding uncertainty, as well as scientific trends and the impact of artificial-intelligence tools on the field.
What is the future of organoid and assembloid regulation?
Four experts weigh in on how to establish ethical guardrails for research on the 3D neuron clusters as these models become ever more complex.
What is the future of organoid and assembloid regulation?
Four experts weigh in on how to establish ethical guardrails for research on the 3D neuron clusters as these models become ever more complex.
Tatiana Engel explains how to connect high-dimensional neural circuitry with low-dimensional cognitive functions
Neuroscientists have long sought to understand the relationship between structure and function in the vast connectivity and activity patterns in the brain. Engel discusses her modeling approach to discovering the hidden patterns that connect the two.
Tatiana Engel explains how to connect high-dimensional neural circuitry with low-dimensional cognitive functions
Neuroscientists have long sought to understand the relationship between structure and function in the vast connectivity and activity patterns in the brain. Engel discusses her modeling approach to discovering the hidden patterns that connect the two.
Whole-brain, bottom-up neuroscience: The time for it is now
Applying new tools to entire brains, starting with C. elegans, offers the opportunity to uncover how molecules work together to generate neural physiology and how neurons work together to generate behavior.
Whole-brain, bottom-up neuroscience: The time for it is now
Applying new tools to entire brains, starting with C. elegans, offers the opportunity to uncover how molecules work together to generate neural physiology and how neurons work together to generate behavior.
Explore more from The Transmitter
A new atlas of abstracts visualizes the field of human brain mapping—where does your work fit?
Satrajit Ghosh talks to Mac Shine about a community-built tool that places every abstract from the 2026 Organization for Human Brain Mapping meeting inside a semantic map of the broader neuroscience literature. Finding your neighbors in that space might matter more than you think.
A new atlas of abstracts visualizes the field of human brain mapping—where does your work fit?
Satrajit Ghosh talks to Mac Shine about a community-built tool that places every abstract from the 2026 Organization for Human Brain Mapping meeting inside a semantic map of the broader neuroscience literature. Finding your neighbors in that space might matter more than you think.
Key role of interferon 1 in maternal immune activation, and more
Here is a roundup of autism-related news and research spotted around the web for the week of 1 June.
Key role of interferon 1 in maternal immune activation, and more
Here is a roundup of autism-related news and research spotted around the web for the week of 1 June.
The illusion of AI consciousness: Lessons from human unconscious processing
Complex, goal-directed and even emotionally responsive behavior can unfold without awareness, providing a useful lens for interpreting artificial systems.
The illusion of AI consciousness: Lessons from human unconscious processing
Complex, goal-directed and even emotionally responsive behavior can unfold without awareness, providing a useful lens for interpreting artificial systems.